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  • 0.5 ...
    http://icl.pku.edu.cn/yujs/papers/pdf/SeqAli.pdf

  • Annual Report on 2003 Project...
    http://nf.apac.edu.au/annual_reports/2003/data/project_reports/Knowles_G_f8

  • 2can Bioinformatics Educational Resource: Protein Analysis - Pairwise local/glob...
    http://www.ebi.ac.uk/2can/tutorials/protein/align.html

  • 374 Genome Informatics 12: 374­375 (2001) ...
    http://www.jsbi.org/journal/GIW01/GIW01P065.pdf

  • Sequence Alignment - Variations ...
    http://www.public.asu.edu/~cbaral/cse591-s03/classnotes/seq-align.pdf

  • EMBOSS: water...
    http://zeon.well.ox.ac.uk/Pise/docs/water.html

  • Bioinformatics.Org: Project Info...
    http://bioinformatics.org/project/?group_id=134

  • man page(1) manual page...
    http://bioweb.pasteur.fr/docs/man/man/pvcomp.1.html

  • JAligner: Java implementation of the Smith-Waterman algorithm for biological seq...
    http://jaligner.sourceforge.net/

  • BioLinux: Bioinformatics and Linux course (2004)...
    http://www.bioinf.kvl.dk/biolinux/week11.html

  • Lab2. Sequence Alignment II ...
    http://www.bioinformatics.ubc.ca/sds/lab/lab1SeqAlign/lab1SeqAlignPart2.pdf

  • GEN 240B, Spring 2002, Sequence Comparisons and Genomics Databases...
    http://www.cs.ucr.edu/~stelo/gen240Bspring02/

  • UCSC BME100 Paper Homework #1: dynamic programming...
    http://www.cse.ucsc.edu/~karplus/bme100/f01/paper1.html

  • 2can Bioinformatics Educational Resource: Nucleotide Analysis - Pairwise local/g...
    http://www.ebi.ac.uk/2can/tutorials/nucleotide/align.html

  • MEDLINE Database, 1987 to date Document Reader...
    http://www.mrc-lmb.cam.ac.uk/genomes/comparison_of_searching_method_Pearson

  • ...
    http://facweb.cs.depaul.edu/bioinformatics/publications/Smith-Waterman-Post

  • ..: institute for computational biomedicine :: course tutorial...
    http://icb.med.cornell.edu/education/courses/introtobio/t-homology.xml

  • DNA ALIGNMNET...
    http://www.bridgeport.edu/sed/projects/cs597/Fall_2003/amitgupt/

  • Statement of Research...
    http://www.cs.ucsd.edu/old/graduate/Applying.For.Jobs/Academic/amonge/among

  • 150 No. 75 Yu and Hwa ...
    http://recomb2000.ims.u-tokyo.ac.jp/Posters/pdf/75.pdf

  • ...
    http://www.calstatela.edu/faculty/jmomand/RationaleForDBsearching_03.ppt

  • Computing Large-Scale ...
    http://www.cs.hku.hk/cluster2003/presentation/technical/1B-2.pdf

  • Bioinformatics and Bioengineering Summer Institute (2003) ...
    http://www.vcu.edu/csbc/bbsi/inst/courses/RS-P2/P2-Pt2-notes.pdf

  • A new approach to sequence comparison: normalized sequence alignment -- Arslan e...
    http://bioinformatics.oupjournals.org/cgi/content/abstract/17/4/327

  • BLAST: Definition and Much More From Answers.com...
    http://www.answers.com/topic/blast-5

  • No Title...
    http://www.dkfz-heidelberg.de/tbi/people/koenig/teaching/Akademie/27_04_02/

  • Entrez PubMed...
    http://www.facultyof1000.com/pubmed/14748004

  • I am not familiar with the mail fasta...
    http://www.msci.memphis.edu/~giri/compbio/f99/meera.html

  • Multilevel Parallel Computation of the Smith-Waterman Algorithm...
    http://serine.umiacs.umd.edu/research/projects/s_w.php

  • ...
    http://www.bic.nus.edu.sg/biogrid/biogrid01/ppt/schmidt.ppt

  • Finding deletion and polysomy ...
    http://www.biometrie.uni-heidelberg.de/workshops/BDEG2003/pdf/price.pdf

  • Comparative Bioinformatics Homework...
    http://www.life.umd.edu/labs/delwiche/bsci348s/homework2002.html

  • CIS524 Demo Lecture...
    http://distancelearning.ksi.edu/demo/524/cis524.htm

  • Heuristische Methoden zum Sequenzvergleich: ...
    http://spot.fho-emden.de/hp/pfitzner/Powerpointfolien/Bioinformatik13.pdf

  • Computational Methods in Molecular Biology - Exercise 1 ...
    http://www.cs.huji.ac.il/course/2003/cbio/exer/ex1/ex1.ps

  • MPsrch preference...
    http://www.dna.affrc.go.jp/htdocs/MPsrch/MPsrchPrefer.html

  • BIOCCELERATOR: Fast searches...
    http://www.es.embnet.org/embnet_common/embnet.news/vol2_1/bioccelerator.htm

  • Lecture about BLAST and FASTA...
    http://www.sbc.su.se/~arne/kurser/swell/blasta-fasta.shtml

  • Multiple Sequence Alignment...
    http://www.life.umd.edu/labs/delwiche/bsci348s/lec/MultAlign.html

  • ATGC Another Tool for Genome Comparison ...
    http://www.ee.udel.edu/~jcuvillo/at_ud/publications/delcuvillo.pdf

  • ...
    http://www.sonoma.edu/users/m/mcdonale/HMM-Bio.ppt

  • ...
    http://capb.dbi.udel.edu/main/seminar/postdoctor-talk/jizhu-talk/RECOMB2002

  • Bioinformatics Training Course...
    http://www.bioinformatics.pe.kr/course/BTC/assignments/assignment1.html

  • ...
    http://klabs.org/mapld04/presentations/session_p/p183_yardley_s.ppt

  • O'Reilly Network: Speedup at What Cost?...
    http://www.oreillynet.com/pub/a/network/2001/11/30/speedup.html

  • A Run-Time Reconfigurable System for Gene-Sequence Searching ...
    http://www.ccm.ece.vt.edu/hokiegene/papers/PID7893.pdf

  • ...
    http://www.infobiogen.fr/db/decrypthon/Repository/FAQ

  • A Sequence Similarity Search Algorithm Based on a Probabilistic ...
    http://www.isrec.isb-sib.ch/ftp-server/papers/ismb96.pdf

  • The Bioinformatics Knowledge Base . WebHome...
    http://apps.bioneq.qc.ca/twiki/bin/view/Knowledgebase/WebHome

  • A Smith-Waterman Systolic Cell ...
    http://www.cse.cuhk.edu.hk/~phwl/mt/public/archives/papers/sw_fpl03.pdf

  • Comparison of methods for searching protein sequence databases -- PEARSON 4 (6):...
    http://www.proteinscience.org/cgi/content/abstract/4/6/1145

  • ...
    http://cumicro2.cpmc.columbia.edu/icb/spring2003/Lecture%202.ppt

  • Useful Links...
    http://webpages.eng.wayne.edu/~ai5998/papers/links.html

  • Biowww.net : Bioscience lab research protocols, methods and troubleshooting disc...
    http://www.biowww.net/index.php/forum/message/115/

  • Database Mining Tools in the Human Genome Initiative...
    http://www.biodatabases.com/whitepaper02.html

  • ...
    http://www.tcd.ie/Genetics/staff/Aoife/GE3026/GE3026_4-6.ppt

  • Biotechnology News and Information Portal and Job and Career Resources...
    http://www.bioexchange.com/tools/web.cfm

  • BioLinux: Bioinformatics and Linux course (2004)...
    http://bioinf.kvl.dk/biolinux/week10.html

  • December 6, 2002 ...
    http://cmgm.stanford.edu/biochem218/Projects%202002/Byang.pdf

  • ...
    http://webpages.eng.wayne.edu/~ai5998/papers/smith_waterman.ppt

  • Protein Search Tools...
    http://www.bioscience.org/urllists/proserch.htm

  • GeneMatcher Help...
    http://www.ch.embnet.org/software/fdf_help.html

  • ...
    http://www.iro.umontreal.ca/~mabrouk/IFT6291/Aut04/Ming-Te.ppt

  • TM ...
    http://www.sencel.com/images/paralign-product-sheet.pdf

  • Sencel Bioinformatics - Products - ParAlign...
    http://www.sencel.com/products/paralign.html

  • Parallel Implementation of the Smith-Waterman Algorithm ...
    http://www.vision.ime.usp.br/~cesar/programa/pdf/3.pdf

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